BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F11SP1|AL426252
(772 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1771 1516 0.0
>3x_Contig1771
Length = 25932
Score = 1516 bits (765), Expect = 0.0
Identities = 772/773 (99%), Gaps = 1/773 (0%)
Strand = Plus / Plus
Query: 1 gatctcactttagggtttctaagttcagatttttttgcaggtttctttggtgca-cttta 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 10568 gatctcactttagggtttctaagttcagatttttttgcaggtttctttggtgcaacttta 10627
Query: 60 ccgttctttttaccgttgcatttggactcttcgtcggtggtaccctgagacaatctaatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10628 ccgttctttttaccgttgcatttggactcttcgtcggtggtaccctgagacaatctaatt 10687
Query: 120 ttttggaaaacctcggagaattcgtccactggatcagtgtcgatgatgttgtacttggcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10688 ttttggaaaacctcggagaattcgtccactggatcagtgtcgatgatgttgtacttggcg 10747
Query: 180 gtagaagccttgctagagtccttgctagagtccttgctagaatttcttttctttggtgga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10748 gtagaagccttgctagagtccttgctagagtccttgctagaatttcttttctttggtgga 10807
Query: 240 ggcggaactgcctttttcgcctttctttgtgcagcaaccgtttcggcgatatcatcgtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10808 ggcggaactgcctttttcgcctttctttgtgcagcaaccgtttcggcgatatcatcgtga 10867
Query: 300 tccttgaaattcctggaagagaagacaggtccggattcgtttaaatcgatctcgtcatcg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10868 tccttgaaattcctggaagagaagacaggtccggattcgtttaaatcgatctcgtcatcg 10927
Query: 360 gattcatcttcaaacgattttttgaccttcccattctttgcactcttctttttcttttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10928 gattcatcttcaaacgattttttgaccttcccattctttgcactcttctttttcttttta 10987
Query: 420 tcggagtcacctccaattctcactgacaacggtttgttaccattgaattcagtgccatca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10988 tcggagtcacctccaattctcactgacaacggtttgttaccattgaattcagtgccatca 11047
Query: 480 tcgtcgctgatgtccacgtccgagtgacgatcatagccgcggtaacgtccaggacgttca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11048 tcgtcgctgatgtccacgtccgagtgacgatcatagccgcggtaacgtccaggacgttca 11107
Query: 540 ggctcattcagagttccgttaatcactttagggtttggttttggtttcggttttggtttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11108 ggctcattcagagttccgttaatcactttagggtttggttttggtttcggttttggtttc 11167
Query: 600 gggttttttccggaatttttttggaccctgacatcgaaatcttcttcatttccagacaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11168 gggttttttccggaatttttttggaccctgacatcgaaatcttcttcatttccagacaaa 11227
Query: 660 ttacgggcagaacctctcgaaggaaaattatcaggtctcgagacagattgaccgcctttc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11228 ttacgggcagaacctctcgaaggaaaattatcaggtctcgagacagattgaccgcctttc 11287
Query: 720 atactcatcagcatctcatagtcctcttttgacaccacaaactcaccctgtga 772
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11288 atactcatcagcatctcatagtcctcttttgacaccacaaactcaccctgtga 11340
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6276
Number of Sequences: 1807
Number of extensions: 6276
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 772
length of database: 10,358,551
effective HSP length: 16
effective length of query: 756
effective length of database: 10,329,639
effective search space: 7809207084
effective search space used: 7809207084
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)